This is a great list to help you with all those subIDs
Adreporting - Replace "way" with "w" and add =%subid%
before: http://www.adreporting.com/dir.php?a=000000&p=00
after : http://www.adreporting.com/dir.php?a=000000&p=00&w=%subid%
Agami Media - Add %subid% at the end
before: http://partners.agamimedia.com/00/000/0000/
after : http://partners.agamimedia.com/00/000/0000/%subid%
AzoogleAds - Add %subid% after ?sub=
before: http://azoogleads.com/1LN55
after : http://azoogleads.com/1LN55?sub=%subid%
ClickBank Add %subid% after ?tid=
before: http://clickbank.hop.clickbank.net/
after : http://clickbank.hop.clickbank.net/?tid=%subid%
ClickBooth - Add %subid% after &optionalinfo=
before: http://www.clickboothlnk.com/e/?enc=bnnvyvfgvsvd&optionalinfo=&deployid=0&land=0&pid=0
after : http://www.clickboothlnk.com/e/?enc=bnnvyvfgvsvd&optionalinfo=%subid%&deployid=0&land=0&pid=0
CommissionXchange - Add %subid% at the end
before: http://commissionxchange.directtrack.com/z/00000/CD0000/
after : http://commissionxchange.directtrack.com/z/00000/CD0000/%subid%
Commission Junction - Add %subid% after ?sid=
before: http://www.tkqlhce.com/click-0000000-00000000
after : http://www.tkqlhce.com/click-0000000-00000000?sid=%subid%
Copeac - Add %subid% after o=
before: http://www.cpaclicks.com/redirect.asp?a=0000&b=00000&d=0&l=0&o=&p=0
after : http://www.cpaclicks.com/redirect.asp?a=0000&b=00000&d=0&l=0&o=%subid%&p=0
CPA Storm - Add %subid% at the end
before: http://media303.com/z/0000/CD0000/
after : http://media303.com/z/0000/CD0000/%subid%
CPAEmpire - Add %subid% at the end
before: http://login.tracking101.com/ez/dxbmwschwmor/
after : http://login.tracking101.com/ez/dxbmwschwmor/%subid%
EliteCommission - Add %subid% at the end
before: http://partners.elitecommission.com/ez/cilkpzeqq/
after : http://partners.elitecommission.com/ez/cilkpzeqq/%subid%
Flux Advertising - Add %subid% at the end
before: http://123.fluxads.com/z/2038/CD3712/
after : http://123.fluxads.com/z/2038/CD3712/%subid%
Hydra Media - Add %subid% after &s=
before: http://www.lynxtrack.com/afclick.php?o=6755&b=gfy5mph6&p=14093&l=1
after : http://www.lynxtrack.com/afclick.php?o=6755&b=gfy5mph6&p=14093&l=1&s=%subid%
IncentAClick/Incenta Click - Add %subid% after ⊂=
before: http://www.incentaclick.com/nclick.php?id=0000&cid=0000
after : http://www.incentaclick.com/nclick.php?id=0000&cid=0000⊂=%subid%
IncentReward - Add %subid% at the end
before: http://incentreward.directtrack.com/z/00000/CD000/
after : http://incentreward.directtrack.com/z/00000/CD000/%subid%
InstantDollarz - Add %subid% after &subid=
before: http://instantdollarz.com/click.php?p=000&c=00000&email=
after : http://instantdollarz.com/click.php?p=000&c=00000&email=&subid=%subid%
IronOffers - Add %subid% at the end
before: http://aff.ironoffers.com/z/000/CD000/
after : http://aff.ironoffers.com/z/000/CD000/%subid%
LeaderClicks - Add %subid% after &SID=
before: http://www.leaderclicks.com/redir.aspx?CID=6315&AFID=21345&DID=29107
after : http://www.leaderclicks.com/redir.aspx?CID=6315&AFID=21345&DID=29107&SID=%subid%
LeaderMarket - Add %subid% at the end
before: http://leadermarkets.com/z/25029/CD8851/
after : http://leadermarkets.com/z/25029/CD8851/%subid%
MarketLeverage - Add %subid% after &opt=
before: http://advertising-claims.com/adscript.php?affid=CD0000&ban=00000&dep=0&land=0&opt=&pool=0&camp=0000
after : http://advertising-claims.com/adscript.php?affid=CD0000&ban=00000&dep=0&land=0&opt=%subid%&pool=0&camp=0000
MaxBounty - Add %subid% after &s1=
before: http://www.maxbounty.com/lnk.asp?o=0000&c=00000&a=00000
after : http://www.maxbounty.com/lnk.asp?o=0000&c=00000&a=00000&s1=%subid%
Modern Click - Add %subid% after &subid1=
before: http://m0dernclick.com/redirect.php?a=CD7820&b=9315&optinfo=&d=0&l=0&p=0
after : http://m0dernclick.com/redirect.php?a=CD7820&b=9315&optinfo=&d=0&l=0&p=0&subid1=%subid%
Millnic Media - Just put %subid% on end
before: http://affiliates.millnicmedia.com/sw/00000/CD0000/
after : http://affiliates.millnicmedia.com/sw/00000/CD0000/%subid%
NeverBlueAds - Add %subid% after &subid=
before: http://neverblueads.com/click/?s=224&c=7820
after : http://neverblueads.com/click/?s=224&c=7820&subid=%subid%
Panthera Network - Add %subid% at the end
before: http://partners.pantheranetwork.com/z/0000/CD000/
after : http://partners.pantheranetwork.com/z/0000/CD000/%subid%
PepperJam Network - Add %subid% after ?sid=
before: http://www.pntrs.com/t/P0dFREFHQj1GRz9DQw
after : http://www.pntrs.com/t/P0dFREFHQj1GRz9DQw?sid=%subid%
Premiere Incentive - Add %subid% after &subid=
before: http://www.premiereincentive.com/Click.aspx?publisher_id=4224&campaign_id=0000&creative_id=000
after : http://www.premiereincentive.com/Click.aspx?publisher_id=4224&campaign_id=0000&creative_id=000&subid=%subid%
Revenue Loop - Add %subid% at the end
before: http://login.revenueloop.com/z/0000/CD0000/
after : http://login.revenueloop.com/z/0000/CD0000/%subid%
Revenue Universe - Add %subid% after &sid=
before: http://publishers.revenueuniverse.com/click.php?affiliate=000&campaign=000&creative=0000
after : http://publishers.revenueuniverse.com/click.php?affiliate=000&campaign=000&creative=0000&sid=%subid%
Rextopia - Add %subid% at the end
before: http://rextopia.com/z/20105/CD4560/
after : http://rextopia.com/z/20105/CD4560/%subid%
Rocket Profit - Add %subid% after &affrefer=
before: http://rocketprofit.com/click.php?bid=454&lpid=102441&rid=rp0257
after : http://rocketprofit.com/click.php?bid=454&lpid=102441&rid=rp0257&affrefer=%subid%
Silver iNet - Add %subid% at the end
before: http://partners.cpacoreg.com/z/00000/CD000/
after : http://partners.cpacoreg.com/z/00000/CD000/%subid%
Tarsus Media - Add %subid% at the end
before: http://affiliates.tarsus-media.com/z/000/CD00/
after : http://affiliates.tarsus-media.com/z/000/CD00/%subid%
The Affiliated - Take out the garbage at the end (&dp=0&l=0&p=0) and add %subid%
before: http://oscartracking.com/ez/dyomrcyoxm/
after : http://oscartracking.com/ez/dyomrcyoxm/%subid%
ThinkAction - Add %subid% at the end
before: http://network.thinkaction.com/z/0000/CD0000/
after : http://network.thinkaction.com/z/0000/CD0000/%subid%
Traffic Venue Direct - Add %subid% at the end
before: http://trafficvenuedirect.com/z/0000/CD0000/
after : http://trafficvenuedirect.com/z/0000/CD0000/%subid%
WebJamAds - Add %subid% at the end
before: http://affiliates.webjamads.com/z/0000/CD000/
after : http://affiliates.webjamads.com/z/0000/CD000/%subid%
Xy7.com - Add %subid% at the end
before: http://publishers.xy7.com/z/48249/CD5519/
after : http://publishers.xy7.com/z/48249/CD5519/%subid%
I also want to say thank you to Wes for such a fantastic application, so THANKS Wes :D